| .gitignore | ||
| cluster.ipynb | ||
| README.md | ||
Cluster
[🚧WIP🚧] Cluster visualisation and filtering tool, uses Jupyter notebook.
Requires the dataviz38 conda environment : conda activate dataviz38
TODO
All computation timings are done with the HTS_libraries_all_v6_PCA_no_structure.csv file
- ✅ Plot 3D cluster (~1:00)
- ✅ Speed upgrade using dask (~4:21)
- ❌ Interactive graph
- ✅ Box, sphere and ellipsoid-based filtering (~1:00, ~1:22, ~1:40)
- ❌ Neighborhood filtering
- ❌ CLI usage