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README.md Update README.md 2024-06-25 15:48:21 +02:00
cluster.ipynb [FEATURE] Final similiarity distributiom 2024-06-17 17:47:42 +02:00

README.md

Cluster

[🚧WIP🚧] Cluster visualisation and filtering tool, uses Jupyter notebook.
Requires the dataviz38 conda environment : conda activate dataviz38

TODO

All computation timings are done with the HTS_libraries_all_v6_PCA_no_structure.csv file

  • Plot 3D cluster (~1:00)
  • Speed upgrade using dask (~4:21)
  • Interactive graph
  • Box, sphere and ellipsoid-based filtering (~1:00, ~1:22, ~1:40)
  • Neighborhood filtering
  • CLI usage